docs(skills): collapse three overlapping skills trees into one verified tree

Three parallel trees documented the same ecosystem: omp-docs/skills/
(two overview pages), tools/npx-skills/ (10 pi-era npm pages), and
tools/vercel-labs-skills/ (11 CLI pages), plus a fourth leaderboard page
at engineering/skills-ecosystem.md. Verbatim overlap (identical SKILL.md
field tables in skills-spec.md vs skill-format.md; 13-agent vs 68-agent
copies of the same upstream table). Consolidated to four concept pages:

- skills/agent-skills.md: standard, format, loading, authoring (merges
  skills-spec, skill-format, skill-file-structure, skill-loading,
  best-practices, skills-vs-extensions)
- skills/skills-cli.md: CLI reference (merges commands, source-formats,
  installation-scope, skill-discovery, lock-file, env-variables,
  agent-support, related-links)
- skills/store-wiring.md: moved, fleet ops, links retargeted
- skills/ecosystem.md: replaces skills-ecosystem.md; stale 2026-08-12
  top-50 table dropped, replaced with a live top-10 re-queried from the
  skills.sh API tonight and the API contract re-verified (zero-based,
  200/page, {skills,total,hasMore,page}, total 9909)

All facts re-verified 2026-10-19 against primary sources:
agentskills.io, vercel-labs/skills README + src/cli.ts (command set,
--full-depth) + src/skill-lock.ts (v3 lock, XDG path, wipe-on-old),
live skills.sh API. Deleted superseded core/index-doc.md (old pi-era
docs index). Retargeted all inbound links (tools/index, engineering x3,
packages x3, pi/skills, core/index). Pi-era npm skill packaging is
listed as archived under /pi/.

Refs #29
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---
type: reference
title: AGENTS.md Index
description: Overview of the cached tool documentation system — how it works, why the pre-flight check matters, and how to add new entries.
tags:
- documentation
- index
- pre-flight-check
- meta
timestamp: 2026-01-15
---
# pi Documentation Index
This directory (`/home/dank/.pi/agent/docs/`) contains cached documentation for tools used during system configuration. It is the agent's primary reference before touching any configuration file.
---
## How to Use
Before configuring any tool, check whether documentation already exists here. If it does not, a subagent **must** be spawned to fetch documentation before proceeding.
This is not a suggestion. It is the difference between "I remember how to configure this" and "I will need to re-read the docs for the third time this week."
---
## Available Tool Documentation
### Core
* [AGENTS.md Format](agents-md-format.md) — Structure specification for the system-level instruction file: layer conventions, naming, summary table format, and add/remove procedures.
### Tools
* [Ghostty Terminal](../tools/ghostty/index.md) — GPU-accelerated terminal emulator. Complete configuration reference with 100+ options organized by category, CLI actions, keybindings, shaders, and default bindings.
* [llama.cpp Server](../tools/llama-cpp/index.md) — LLM inference server. GGUF format, build guides (CPU/CUDA/Metal/Vulkan), server CLI options, API endpoints, Docker setup, and curl examples.
* [Linux Power Management](../tools/linux-power-management.md) — Systemd sleep configuration, kernel sleep states, NVIDIA GPU suspend/resume, diagnostic tools, kernel parameters, and automated testing procedures.
* [Niri](../tools/niri/index.md) — Scrollable-tiling Wayland compositor. Full keybind cheat sheet, configuration syntax, window management, workspace navigation, and action reference.
### Pi Packages
* [pi-browser-use](../packages/pi-browser-use.md) — Browser automation extension wrapping chrome-devtools-mcp with `browser_` prefix, full config reference, session modes, vision model setup, and tool augmentation docs.
* [pi-permission-system](../packages/pi-permission-system.md) — 10 docs covering permission enforcement, config reference, session approvals, cross-extension API, subagent integration, troubleshooting, and migration guides.
### Skills
* [Npx Skills](../skills/npx-skills.md) — Distribution and installation patterns for agent skills via npm, package structure, SKILL.md frontmatter, discovery rules, and the Agent Skills specification.
* [Vercel Labs `skills` CLI](../skills/vercel-skills.md) — CLI meta-installer for cross-agent skill distribution, supporting 68+ agents, with add/use/find/list/update/remove commands.
### References
* [OKF v0.1 Specification](../references/okf-spec.md) — Complete specification for OKF knowledge bundles: bundle structure, frontmatter fields, concept documents, index/log files, cross-linking, and conformance rules.
* [OKF Bundle Maintenance](../references/okf-maintenance.md) — Bundle maintenance: log.md format, frontmatter discipline, one-concept-per-file, staleness detection, and automation strategies.
---
## Adding New Tool Documentation
When a subagent fetches documentation for a new tool:
1. Save it to `tools/<tool-name>/index.md` (multi-file) or `tools/<tool-name>.md` (small, single-concept).
2. Add an entry to this index table.
3. Include a brief description of what the document covers.
4. Add YAML frontmatter with `type` and `description`.
5. Update `log.md` with the change.
---
## Index Format
Give each row this content:
- **Tool** — the tool or technology name
- **File / Path** — relative path within this directory
- **Status** — for example, "Complete", "Partial", "Needs Update"
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## Concept Files
* [AGENTS.md Format Specification](agents-md-format.md) — Canonical structure and conventions for the system-level instruction file that governs agent behavior.
* [AGENTS.md Index](index-doc.md) — Overview of the cached tool documentation system and how to add new entries.
* [Pi Settings System](settings.md) — pi-era `settings.json` record (archive): providers, models, packages, subagent overrides.
* [dankvoice](dankvoice.md) — Cloned-voice vocalization extension: `/say` and auto-speak over frank-tts, endpoint read from `agent/models.yml`.